Finger Millet (Eleusine coracana (L.) Gaertn.) Genetics and Breeding for Rapid Genetic Gains

  • S. Ramesh
  • T. V. Krishna


Finger millet is one of the most ancient cereal staple crops in the world. It is predominantly grown in rain-fed ecosystems of arid and semi-arid tropics of Africa and Asia. It supports millions of people living in relatively dry regions of Africa and Asia. Its excellent storability for several years under ambient conditions makes it an ideal crop for famine reserves. Low glycemic index and absence of gluten in the grain makes finger millet an ideal food for diabetic patients or those prone to diabetics, a deadly degenerative malady. Further, due to low protein efficiency ratio value, it is an antidote for obesity. Conventional phenotype-based breeding has led to significant genetic gains. Further enhancement of its economic value through development of stable and widely adapted high-yielding varieties is expected to offer competitive edge to finger millet over other comparable cereals to enable its popularity and wider cultivation. However, it requires the use of genomic resources such as DNA markers, candidate genes, and transcription factors to implement different forms of marker-assisted selection like F2 enrichment, marker-assisted recurrent and genomic selections, and genome editing to enhance pace and efficiency of breeding finger millet. The objective of this chapter is to discuss the origin, economic importance, status of germplasm and its characterization and evaluation, cytogenetics, genetics of qualitative and quantitative traits, breeding for resistance to biotic production constraints, especially blast disease, and the use of genomic resources for enhancing the pace and precision of breeding finger millet for higher productivity.


Cytogenetics Finger millet Genetics Genomic resources Genomic selection 


  1. Acheampong E, Anishetty NM, Williams JT (1974–84) A world survey of sorghum and millets germplasm (International Board for Plant Genetic Resources First Decade of Service, ICRISAT, India). IBPGR, RomeGoogle Scholar
  2. Arya L, Manjusha V, Gupta VK, Karihaloo JL (2009) Development of EST-SSRS in finger millet and their transferability to pearl millet. J Plant Biochem Biotechnol 18:97–100Google Scholar
  3. Ayyangar GNR, Warier VA (1931) Grain colour factors and their relationship to purple pigmentation. Indian J Agric Sci 1:454–468Google Scholar
  4. Ayyangar GNR, Warier VA (1933) Pt VIII: earhead colour factors in ragi. Indian J Agric Sci 3:1072Google Scholar
  5. Bhaskariah KB, Mallanna KN (1997) Scope and achievements of ragi breeding in India. Proceedings of the 10th symposium on ragi held on 27–28 Dec 1977 at UAS, BangaloreGoogle Scholar
  6. Burkil IH (1935) A dictionary of economic products of Malay Peninsula. Crown Agents for the Colonies, LondonGoogle Scholar
  7. Byregowda M, Shankaregowda BT, Seetharam A (1997) Association of bio-chemical compounds with blast disease in finger millet. In extended summary: national seminar on small millets, ICAR and TNAU, Coimbatore, IndiaGoogle Scholar
  8. Byregowda M, Shankaregowda BT, Seetharam A (1999) Variability and inheritance of bio-chemical compounds determining resistance to blast, yield and other attributes in finger millet. Mysore J Agric Sci 33:197–200Google Scholar
  9. Chalam GV, Venkateswarlu J (1965) Introduction to agricultural botany in India. Asia Publishing House, New DelhiGoogle Scholar
  10. Chennaveeriah MS, Hiremath SC (1974) Genome analysis of Eleusine coracana. Euphytica 23:489–490Google Scholar
  11. Coleman LC (1922) Cultivation of ragi in Mysore. General bulletin, 11, Department of Agriculture, MysoreGoogle Scholar
  12. Das S, Misra RC (2010) Assessment of genetic diversity among finger millet genotypes using RAPD markers. Indian J Agric Res 44(2):112–118Google Scholar
  13. Das S, Misra RC, Rout GR, Pattanaik MC, Aparajitha S (2009) Relationship of status of polymorphic RAPD bands with genotypic adaptation in early finger millet genotypes. Afr Crop Sci J 17(2):61–69Google Scholar
  14. Devos K (2005) Crop plant, FAO report ID 5657Google Scholar
  15. Dida MM, Srinivasachary RS, Bennezen JL, Gale MD, Devos KM (2007) The genetic map of fingermillet, Eleusine coracana. Theor Appl Genet 114(2):321–332PubMedGoogle Scholar
  16. Dodake SS, Dhonukshe BL (1998) Variability in floral structures and floral biology in millet. Indian J Genet 58:107–112Google Scholar
  17. Dwivedi S, Upadhyaya HD, Senthilvel S, Hash C, Fukunaga K, Diao X et al (2012) Millets: genetic and genomic resources. In: Janick J (ed) Plant breeding reviews. John Wiley and Sons, Inc., Hoboken, NJ, pp 247–374Google Scholar
  18. Fakrudin B, Kulkarni RS, Hittalamani S (1998) Genotypic variation for recovery of true by contact method of hybridization in finger millet. Curr Res 27:122–123Google Scholar
  19. Fakrudin B, Kulkarni RS, Shashidhar HE, Hittalmani S (2004) Genetic diversity assessment of finger millet germplasm through RAPD analysis. Plant Genet Resour Newsl 138:50–54Google Scholar
  20. Gowda BTS, Sheriff RA (1986) Cytogenetics, genetics and breeding of small millets in Karnataka. International workshop on small millets, 29 Sep 29 and 3 Oct 1986Google Scholar
  21. Gowda MB, Seetharam A, Gowda BTS (1999) Selection for combining grain yield with high protein and blast resistance in finger millet. Indian J Genet 59:1345Google Scholar
  22. Gupta RR et al (1997) Finger millet genetic male sterile line TNFAM 95001 (ICRISAT). Plant Mater Descrip 71:4Google Scholar
  23. Gupta RR, Kumar S (2009) Hybrid vigour for yield and component traits in finger millet. Crop Res 38:167–169Google Scholar
  24. Gupta SC, Verma BM, Mnyemyembe PH, Banda MHP, Chambo HS (1989–90) Results of collaborative F.M. trials during 1989–90. Proceedings of the 6th regional workshop on sorghum and millets for Southern Africa, Zimbabwe, pp. 18–28Google Scholar
  25. Gurunathan MS, Veerabadran P, Sentil N (2006) Combining ability studies in finger millet for yield and quality traits. Crop Res 31:383–390Google Scholar
  26. Goron TL, Raizada MN (2015) Genetic diversity and genomic resources available for the small millet crops to accelerate a New Green Revolution. Front Plant Sci 6:Article157Google Scholar
  27. Hilu KW, de Wet JMJ (1976a) Domestication of Eleusine coracana. Econ Bot 30:199–208Google Scholar
  28. Hilu KW, de Wet JMJ (1976b) Racial evolution in Eleusine coracana ssp. coracana (finger millet). Am J Bot 63:1311–1318Google Scholar
  29. Hilu KW, De Wet JMJ, Harlan JR (1979) Archiobotanical studies of Eleusine coracana, ssp. finger millet. Am J Bot 66:330–333Google Scholar
  30. Hittalmani S, Mahesh H, Shrike MD, Biradar H, Uday G, Aruna Y (2017) Genome and transcriptome sequence of finger millet (Eleusine coracana (L.) Gaetrn.) provides insights into drought tolerance and nutraceutical properties. BMC Genomics 18:465. Scholar
  31. Hutchinson JB (1965) Essays on crop plant evolution. Cambridge University Press, New York, NYGoogle Scholar
  32. IPCC (Intergovernmental Panel on Climate Change) (2007) Summary for policymakers. In: Climate Change 2007–the IPCC fourth assessment report (AR-4). Accessed 2 Feb 2008
  33. Kanwal P, Gupta S, Arora S, Kumar A (2014) Identification of genes involved in carbon metabolism from Eleusine coracana (L.) for understanding their light-mediated entrainment and regulation. Plant Cell Rep 33:1403–1411. Scholar
  34. Kempanna C, Lakshmi PV, Nasarath R (1976) Karyological studies in Eleusine coracana. Nucleus 19:200–203Google Scholar
  35. Kempanna C, Tirumalachar DK (1968) Studies on phenotypic and genotypic variation in ragi. Mysore J Agric Sci 2:121–124Google Scholar
  36. Krishnaswamy N (1951) Origin and distribution of millets. Indian J Genet 11:62Google Scholar
  37. Latha AM, Rao KV, Reddy VD (2005) Production of transgenic plants resistant to leaf blast disease in finger millet. Plant Sci 169(4):657–667Google Scholar
  38. Madhukeshwara SS (1990) Studies on variability in Pyriculariagrisae with particular reference to virulence. Master thesis, UAS, BangaloreGoogle Scholar
  39. Mallanna KN, Mallikarjunaradhya K, Chanabyregowda MV, Umashankar R (1978) A study of variability in a world collection of E. coracana. National symposium on genetic resources. IARI, New DelhiGoogle Scholar
  40. Mantur SG, Madhukeshwara SS, Anil Kumar TB, Viswanath S (2002) Evaluation of prerelease and released varieties of finger millet for blast resistance and yield. Environ Edn Stud Tokyo 12:23–25Google Scholar
  41. Mehra KL (1963) Consideration on the African origin of Eleusine coracana. Curr Sci 32:300–301Google Scholar
  42. Mnyenyembe PH, 1990. A review of F.M. improvement in Malawia. Proceedings of the 6th regional workshop on sorghum and millets, Bulawayo, ZimbabweGoogle Scholar
  43. Nayar KMD, Pushpa G, Shambulingappa KG, Reddy BGS (1978) Karyo-morphological studies in the genus Eleusine. Mysore J Agric Sci 13:141–147Google Scholar
  44. Newman M (2005) Agriculture for 21st century. FAO report. Crop plant ID.5667Google Scholar
  45. Pall BS (1992) Biochemical studies on blast disease of finger millet. Bioved 3:153–154Google Scholar
  46. Parvathi MS, Nataraja KN (2017) Discovery of stress responsive TATA-box binding protein associated factor (TAF6) from finger millet (Eleusine coracana (L.) Gaertn). J Plant Biol 60:335–342Google Scholar
  47. Parvathi MS, Nataraja KN, Yashoda B, Ramegowda H, Mamrutha H, Rama N (2013) Expression analysis of stress responsive pathway genes linked to drought hardiness in an adapted crop, finger millet (Eleusine coracana). J Plant Biochem Biotechnol 22:193–201Google Scholar
  48. Pudake RN, Mehta CM, Mohanta TK, Sharma S, Varma A, Sharma AK (2017) Expression of four phosphate transporter genes from finger millet (Eleusine coracana L.) in response to mycorrhizal colonization and Pi stress. Biotechnology 7:17Google Scholar
  49. Ramappa HK, Ravishankar CR, Prakash P (2002a) Estimation of yield loss and management of blast disease in ragi. Proceedings of the Asian congress on mycology, plant patholgy, University of MysoreGoogle Scholar
  50. Ramappa HK, Ravishankar CR, Prakash P (2002b) Screening of finger millet promising genotypes against blast disease. In: Abstract of proceedings of the IPS (SZ) symposium on plant disease scenario in Southern India, 19–21 Dec 2002, p. 13Google Scholar
  51. Ramappa HK, Ravishankar CR, Prakash P (2002c) Integrated management of blast disease of finger millet. In: Abstract of proceedings of the IPS (SZ) symposium on plant disease scenario in Southern India, 19–21 Dec 2002, p. 14Google Scholar
  52. Ramaswamy P, Ramalingam A, Shanmugavalli N, Sundarapandian G (1994) Variation and characterization on green fodder yield and component traits in ragi. Madras Agric J 81:411–413Google Scholar
  53. Ramaswamy R, (1995) Studies on blast disease in finger millet. Ph.D. thesis, TNAU, CoimbatoreGoogle Scholar
  54. Ramegowda V, Gill US, Sivalingam PN, Gupta A, Gupta C, Govind G (2017) GBF3 transcription factor imparts drought tolerance in Arabidopsis thaliana. Sci Rep 7:9148PubMedPubMedCentralGoogle Scholar
  55. Ramegowda V, Senthil-Kumar M, Nataraja K, Reddy MK, Mysore KS, Udaykumar M (2012) Expression of finger millet transcription factor. EcNAC1, in tobacco confers abiotic stress-tolerance. PLoS One 7:e40397. Scholar
  56. Rath GC, Mishra D (1975) Nature of losses due to neck blast infection in ragi. Sci Cult 41:322Google Scholar
  57. Ravikumar RL, Seetharam A (1990) Inheritance of plant pigmentation in finger millet. Crop Improv 17:141–143Google Scholar
  58. Ravikumar RL, Seetharam A (1994) Genetic variation in yield and its components in relation to blast disease caused by P. grisae in finger millet. Indian J. Agric Sci 64:103–106Google Scholar
  59. Sanath Kumar VB, Anil Kumar TB, Nagaraju I (2002) Early events of infection by Pyriculariagrisae in resistant and susceptible finger millet genotypes. In: Abstract of Proceedings of the IPS (SZ) symposium on plant disease scenario in Southern India, 19–20 Dec 2002, p. 15Google Scholar
  60. Seetharam A, Jayaramegowda, Haider ZA, Gupta A, Venkateshwara Rao T, Mahadeviah C, Somu G (2005) Finger millet core germplasm for utilization in crop improvement. AISMIP (ICAR), UAS, Bangalore, pp 1–171Google Scholar
  61. Seetharam A, Ravikumar RL (1993). Blast resistance in finger millet, its inheritance and biochemical nature. In: Advances in Small millets. (Eds). Riley KW, Gupta SC, Seetharam A, Mushanga JN. Oxford Publshing Co. Ltd. 449–465Google Scholar
  62. Seetharam A, Viswanath S (1983) Identification of sources of resistance to ragi blast and its utilization in breeding. In: Proceedings of the seminar in breeding crop plants for resistance to pests and diseases. TNAU, CoimbatoreGoogle Scholar
  63. Shailaja HB, Thirumani S, Paramasivam RT (2009) Combining ability analysis in finger millet under salinity. Electron J Plant Breed 1:129–139Google Scholar
  64. Shanthakumar G, Gowda BTS (1998) Inheritance of some qualitative characters in the cross WR.9 x U.6 of E. coracana. Indian J Genet 58:381–382Google Scholar
  65. Somappa KM (1999) Mechanism of resistance and biocontrol of blast of ragi caused by Pyriculariagrisae resistance. M.Sc. (Agri.) thesis, UAS, Bangalore, p 102Google Scholar
  66. Sumathi P, Joel AJ, Muralidharan V (2005) Combining ability and heterosis for grain yield and its component traits in finger millet. Int Sorghum Millet Newsl 46:92–95Google Scholar
  67. Sundareshan N, Prasad MN (1983) Ragi improvement in Tamil Nadu. National symposium on finger millet genetics and breeding. 12–13 Jan 1983, UAS, BangaloreGoogle Scholar
  68. Thomas KH (1941) Notes on plant diseases in 1940. Malay Agric J 24:241–245Google Scholar
  69. Tyagi DVS, Rawat RS (1989) Two new ragi var. for rainfed areas. Indian Farm 38:3Google Scholar
  70. Umashankar R, Setty BAS (1977) Botany of ragi Eleusine coracana. Symposium on ragi, 27–28 Dec 1977, UAS, BangaloreGoogle Scholar
  71. Upadhyaya HD, Gowda CLL, Pundir RPS, Reddy VG, Singh S (2006) Development of core sub-set of finger millet germplasm using geographical origin and data on 14 qualitative trials. Genet Resour Crop Evol 53:679–685Google Scholar
  72. Vaidehi MP (1986) Nutritive value and utilization of finger millet (ragi). International workshop on small millets, 29 Sep–3 Oct, 1986, pp 55–58Google Scholar
  73. Vijayaraghavan C, Warier VA (1949) Influence of panicle shape on the vegetative characters in ragi. Proceedings of the 8th Indian congress, part III. Agriculture SectionGoogle Scholar
  74. Viswanath S, Lucy Chennamma K (1987) Seasonal incidence of blast, foot rot, virus and vector population on finger millet. Millets Newsl 6:45Google Scholar

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© Springer Nature Switzerland AG 2020

Authors and Affiliations

  • S. Ramesh
    • 1
  • T. V. Krishna
    • 1
  1. 1.University of Agricultural SciencesBengaluruIndia

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